Your kombucha is becoming gel-like or forming a SCOBY in the bottle because it's continuing to ferment due to residual yeast and bacteria activity, even after bottling. This is a natural process, especially if there's still sugar available.
Kombucha is a living culture, and even after you bottle it, the yeast and bacteria present in the liquid continue to consume any remaining sugars. This fermentation process produces cellulose, which is what forms the SCOBY (Symbiotic Culture of Bacteria and Yeast). The gel-like consistency is also a result of this continued fermentation and the production of polysaccharides by the bacteria. Several factors contribute to this:
Residual Sugar: If the kombucha wasn't fermented long enough before bottling, there might be a significant amount of sugar left for the microbes to consume.
Temperature: Warmer temperatures accelerate fermentation. If you store your bottled kombucha at room temperature, the fermentation process will continue more rapidly.
Yeast and Bacteria Activity: The specific strains of yeast and bacteria in your SCOBY can influence how quickly and intensely fermentation occurs after bottling.
Bottle Condition: The type of bottle used can affect carbonation and SCOBY formation. Bottles designed for pressure (like those used for beer) are better at containing the carbon dioxide produced during fermentation.
The formation of a small SCOBY or a slight gel-like consistency is generally harmless and doesn't mean your kombucha is spoiled. It's simply a sign that the fermentation process is ongoing.
To minimize SCOBY formation in the bottle, try cold crashing your kombucha in the refrigerator for a few days before bottling. This slows down the fermentation process significantly and reduces the activity of the yeast and bacteria.